CDS

Accession Number TCMCG060C28511
gbkey CDS
Protein Id YP_005090169.1
Location complement(join(22374..23903,24750..25184))
Gene rpoC1
GeneID 11542294
Organism Ricinus communis
locus_tag RCOM_ORF00020

Protein

Length 654aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA34677
db_source NC_016736.1
Definition RNA polymerase beta subunit (chloroplast) [Ricinus communis]
Locus_tag RCOM_ORF00020

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-directed RNA polymerase
KEGG_TC -
KEGG_Module M00183        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03046        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0009295        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATTGATCGGTATAAACATCAACAACTCCGAATTGGATCAGTTTCGCCTCAACAAATAAGTGCTTGGGCCAAAAAAATCCTACCTAATGGGGAGATTGTTGGAGAAGTGACAAAACCCTATACTTTTCATTACAAAACCAATAAACCTGAAAAAGGTGGATTGTTTTGTGAAAGAATTTTTGGGCCTATAAAAAGTGGAATTTGTGCTTGTGGAAATTATCGAGTAATCAGAAATGAAAAAGAAGACCAAAAATTTTGTGAACAATGCGGAGTCGAATTTGTTGATTCTCGGATACGAAGATATCAAATGGGCTACATCAAACTGGCATGCCCAGTAACTCATGTGTGGTATTTGAAACGTCTTCCTAGTTATATCGCAAATCTTTTAGATAAACCTCTTAAAGAATTAGAAGGCCTAGTATATTGCGATGTGAAATACAGTATTCCACTTTTTTTTACTGCCCAAGGCTTCGATACATTTCGAAATCGAGAAATTTCTACAGGAGCTGGTGCTATCCGAGAACAATTAGCCGATCTAGATTTGCGAATTATTATAGATTATTCATCGGTAGAATGGAAAGAATTAGGGGAAGAAGGGCCTACGGGGAATGAATGGGAAGATCGAAAAGTTGGAAGAAGAAAGGATTTTTTGGTTCGACGCGTGGAATTAGCTAAGCATTTTATTCGAACAAATATAGAACCAGAATGGATGGTTTTATGTCTATTACCAGTTCTTCCTCCCGAGTTGAGACCGATCATTCAGATAGATGGGGGTAAACTAATGAGTTCAGATATTAATGAACTCTATAGAAGAGTTATCTATCGGAACAATACTCTTATTGATCTATTAACAACAAGTAGATCTACGCCAGGAGAATTAGTAATGTGTCAGGAAAAATTAGTACAAGAAGCCGTGGATACACTTCTTGATAATGGAATCCGCGGACAACCAATGAGAGACGGTCATAATAAGGTTTACAAGTCGTTTTCGGATGTAATTGAAGGCAAAGAAGGAAGATTTCGTGAGACTATGCTTGGAAAACGGGTTGATTATTCGGGGCGTTCTGTCATTGTCGTAGGCCCCTCACTTTCATTACATCGATGTGGATTGCCTCGCGAAATAGCAATAGAACTTTTCCAGATATTTGTAATTCGTGGTCTAATTAGACAACATCTTGCTTCGAACATAGGAGTTGCTAAGAGTAAAATTCGGGAAAAAGAGCCAATTGTATGGGAAATACTTCAGGAAGTTATGCAGGGGCATCCGGTATTACTGAATAGAGCGCCGACTTTGCATAGATTAGGCATACAGGCATTCCAACCCATTTTAGTGGAAGGCCGCGCTATTTGTTTACATCCATTAGTTTGTAAGGGATTCAATGCAGACTTTGATGGGGATCAAATGGCTGTTCATGTACCTTTATCGTTGGAGGCTCAAGCGGAGGCTCGTTTACTTATGTTTTCTCATATGAATCTCTTATCTCCAGCTATTGGAGATCCCATTTCCGTACCAACTCAAGATATGCTTATTGGGCTCTATGTATTAACAAGCAGGAATCGCCGAGGTATTTGTGCAAATAGGTATAATCCATGTAATCACAGAAATTATCAAAATGAAAGAATTTACGATAATAACAATCAATATACGAAAGAATCCTTTTTTTCTAATTCCTATGATGCAATTGGTGCTTATCGGCAGAAAAGAATCAATTTAGATAGTCCTTTGTGGCTCCGTTGGCAACTAGATCAACGCGCTATTGCTTCAAGAGAAGCTCCCGTCGAAGTTCACTATGAATCTTTGGGTACCTATCATGAGATTTATGAACACTATCTAATAGTAAGAAATATAAAAAAAGAAATTCTTTGTATATACATTCGAACTACTGTTGGTCATATTTCTCTTTATCGAGAAATCGAAGAAGCTATACAAGGGTTTTGCCAAGCCGGCTCAGATGGTATCTAA
Protein:  
MIDRYKHQQLRIGSVSPQQISAWAKKILPNGEIVGEVTKPYTFHYKTNKPEKGGLFCERIFGPIKSGICACGNYRVIRNEKEDQKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDVKYSIPLFFTAQGFDTFRNREISTGAGAIREQLADLDLRIIIDYSSVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETMLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQIFVIRGLIRQHLASNIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSRNRRGICANRYNPCNHRNYQNERIYDNNNQYTKESFFSNSYDAIGAYRQKRINLDSPLWLRWQLDQRAIASREAPVEVHYESLGTYHEIYEHYLIVRNIKKEILCIYIRTTVGHISLYREIEEAIQGFCQAGSDGI